STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA76073.1Cell division protein ZapA. (147 aa)    
Predicted Functional Partners:
SFA76032.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
   
 0.912
SFA76011.1
Peptidoglycan glycosyltransferase.
 
   
 0.870
SFA76050.1
Putative protease.
     
 0.854
SFA75966.1
Protein of unknown function.
 
     0.816
ruvB
Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.805
SFB09833.1
Hypothetical protein.
 
 
   0.796
SFA75945.1
Uncharacterized spore protein YtfJ.
 
     0.788
ruvA
Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
    0.788
SFB18386.1
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
  
    0.777
SFA98838.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.