STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA76607.1ABC-2 type transport system ATP-binding protein. (350 aa)    
Predicted Functional Partners:
SFA76586.1
ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein.
 
 0.994
SFA76563.1
Lipopolysaccharide transport system permease protein.
 
 0.992
SFA77574.1
Teichoic acid transport system permease protein.
 
 0.987
SFA77423.1
ABC-2 type transport system permease protein/teichoic acid transport system permease protein.
 
 0.983
SFB13192.1
Glycosyltransferase, GT2 family.
 
 
 0.827
SFA77649.1
Glycosyltransferase, GT2 family.
 
 
 0.815
SFA76676.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.763
SFA76540.1
Glycosyl transferase family 2.
  
  
 0.761
SFA76655.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  
 0.723
SFA76629.1
Hypothetical protein.
  
    0.722
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.