STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB00170.1Energy-coupling factor transport system ATP-binding protein. (493 aa)    
Predicted Functional Partners:
SFB00153.1
Energy-coupling factor transport system permease protein.
 
 0.986
SFB00132.1
Energy-coupling factor transport system substrate-specific component.
 
     0.948
SFB32130.1
Energy-coupling factor transport system permease protein.
 
 0.944
SFB34649.1
Energy-coupling factor transport system permease protein.
 
 0.943
SFA97167.1
Energy-coupling factor transport system permease protein.
 
 0.922
SFA93516.1
Energy-coupling factor transport system permease protein.
 
 0.891
SFB00191.1
ATP-binding cassette, subfamily B.
  
 
0.851
SFB00206.1
ATP-binding cassette, subfamily B.
 
  
 
0.820
SFB03773.1
Energy-coupling factor transport system permease protein.
 0.815
SFA97143.1
Energy-coupling factor transport system substrate-specific component.
 
     0.781
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.