STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB11171.1ABC-2 type transport system ATP-binding protein. (244 aa)    
Predicted Functional Partners:
SFB11187.1
ABC-2 type transport system permease protein.
 
    0.965
SFA83956.1
Putative ABC transport system ATP-binding protein.
 
  
 0.921
SFA99619.1
Putative ABC transport system ATP-binding protein.
 
  
0.917
SFB16819.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
   
 
0.914
SFB10018.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
   
 
0.898
SFA97525.1
Putative ABC transport system ATP-binding protein.
 
  
0.847
SFB20952.1
ABC-2 type transport system permease protein.
  
 0.815
SFB35464.1
NitT/TauT family transport system ATP-binding protein.
 
  
 
0.787
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
     
 0.763
SFB09346.1
Putative ABC transport system ATP-binding protein.
 
  
0.755
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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