STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB10033.1Amino acid ABC transporter substrate-binding protein, PAAT family. (297 aa)    
Predicted Functional Partners:
SFB09984.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.992
SFB09999.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.990
SFB10018.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.968
SFB10079.1
D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family.
 
  
 0.908
SFB23074.1
Amino acid ABC transporter membrane protein, PAAT family.
 
 0.860
SFB35865.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.828
SFB04218.1
Polar amino acid transport system permease protein.
 
 0.826
SFB06167.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.819
SFB23090.1
Putative lysine transport system ATP-binding protein.
 0.818
SFB04236.1
Polar amino acid transport system ATP-binding protein.
 
 0.793
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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