STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB15570.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (306 aa)    
Predicted Functional Partners:
SFB15594.1
Peptide/nickel transport system permease protein.
 
 0.998
SFB15543.1
Peptide/nickel transport system ATP-binding protein.
 
 
0.993
SFB15615.1
Peptide/nickel transport system permease protein.
 
 0.978
SFB29771.1
Peptide/nickel transport system permease protein.
 
 0.959
SFB22979.1
Peptide/nickel transport system permease protein.
 
 0.958
SFB28403.1
Peptide/nickel transport system permease protein/nickel transport system permease protein.
 
 0.955
SFB05586.1
Peptide/nickel transport system permease protein.
 
 0.946
SFB34761.1
Peptide/nickel transport system permease protein/nickel transport system permease protein.
 
 0.946
SFB15640.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.939
SFA90007.1
Peptide/nickel transport system permease protein.
 
 0.935
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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