STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB29653.1Na+-driven multidrug efflux pump. (457 aa)    
Predicted Functional Partners:
SFA80046.1
Cytidylate kinase.
      0.815
SFA98544.1
Cytidylate kinase.
      0.778
SFA94300.1
Na+-driven multidrug efflux pump.
  
     0.769
SFA71762.1
Cytidylate kinase.
      0.766
SFA78795.1
PAP2 superfamily protein.
   
 
 0.543
SFB37551.1
Putative efflux protein, MATE family.
  
   
 0.475
SFA68728.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.472
SFB29637.1
Phosphoserine phosphatase.
       0.437
SFA76266.1
Small subunit ribosomal protein S1/4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
   
    0.424
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
   
    0.424
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.