STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB38997.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SFB38985.1
Hypothetical protein.
       0.651
SFA89813.1
Nicotinamide-nucleotide amidase/nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.607
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.583
SFB25178.1
Two-component system, chemotaxis family, response regulator CheY.
    
  0.580
SFA70379.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.484
SFB39012.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
       0.420
SFB39023.1
Hypothetical protein.
       0.420
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.