STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429165_02740Unannotated protein. (95 aa)    
Predicted Functional Partners:
GCA_000429165_02739
Unannotated protein.
       0.773
GCA_000429165_02737
Unannotated protein.
       0.533
GCA_000429165_02738
Unannotated protein.
       0.533
GCA_000429165_02741
Unannotated protein.
       0.505
Your Current Organism:
Acetobacter nitrogenifigens
NCBI taxonomy Id: 1120919
Other names: A. nitrogenifigens DSM 23921 = LMG 23498, Acetobacter nitrogenifigens BCRC 80095, Acetobacter nitrogenifigens DSM 23921, Acetobacter nitrogenifigens DSM 23921 = LMG 23498, Acetobacter nitrogenifigens LMG 23498, Acetobacter nitrogenifigens LMG 23498 = DSM 23921, Acetobacter nitrogenifigens NBRC 105050, Acetobacter nitrogenifigens RG1, Acetobacter sp. RG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.