STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429165_03213Unannotated protein. (706 aa)    
Predicted Functional Partners:
bfrC
Unannotated protein.
  
    0.768
GCA_000429165_02870
Unannotated protein.
  
    0.571
GCA_000429165_01332
Unannotated protein.
   
   0.551
GCA_000429165_02623
Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
   0.551
GCA_000429165_01842
Unannotated protein.
  
     0.440
GCA_000429165_02774
Unannotated protein.
   
   0.414
GCA_000429165_03198
Unannotated protein.
   
   0.414
GCA_000429165_02767
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.406
Your Current Organism:
Acetobacter nitrogenifigens
NCBI taxonomy Id: 1120919
Other names: A. nitrogenifigens DSM 23921 = LMG 23498, Acetobacter nitrogenifigens BCRC 80095, Acetobacter nitrogenifigens DSM 23921, Acetobacter nitrogenifigens DSM 23921 = LMG 23498, Acetobacter nitrogenifigens LMG 23498, Acetobacter nitrogenifigens LMG 23498 = DSM 23921, Acetobacter nitrogenifigens NBRC 105050, Acetobacter nitrogenifigens RG1, Acetobacter sp. RG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.