STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ80368.1Site-specific DNA recombinase. (400 aa)    
Predicted Functional Partners:
SCZ80369.1
Site-specific DNA recombinase.
 
    
0.815
SCZ79498.1
Recombinase zinc beta ribbon domain-containing protein.
  
     0.726
SCZ80367.1
Recombinase zinc beta ribbon domain-containing protein.
 
    
0.578
SCZ80433.1
Hypothetical protein.
  
    0.573
SCZ80427.1
Protein of unknown function.
  
    0.571
SCZ80430.1
Hypothetical protein.
  
     0.569
SCZ80432.1
DNA modification methylase.
 
  
 0.559
SCZ80370.1
Hypothetical protein.
       0.520
SCZ80450.1
Hypothetical protein.
  
     0.519
SCZ80382.1
Toxin secretion/phage lysis holin.
 
    0.515
Your Current Organism:
Acidaminobacter hydrogenoformans
NCBI taxonomy Id: 1120920
Other names: A. hydrogenoformans DSM 2784, Acidaminobacter hydrogenoformans DSM 2784
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.