STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE29995.13-oxoacyl-[acyl-carrier protein] reductase. (249 aa)    
Predicted Functional Partners:
SHE30036.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    
0.717
SHE44160.1
Glutamate synthase (NADPH) large subunit.
     
 0.714
SHF49868.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
     
 0.674
SHE30012.1
NitT/TauT family transport system substrate-binding protein.
       0.642
SHE95363.1
[acyl-carrier-protein] S-malonyltransferase.
 
  0.570
SHF42668.1
Phosphate butyryltransferase.
 
 0.562
SHE30050.1
Dihydropyrimidinase.
       0.531
SHE45866.1
Urea carboxylase precursor.
  
 
 0.527
SHF50510.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.520
SHE47326.1
Hypothetical protein.
   
  0.483
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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