STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE36396.1Chemotaxis protein MotB. (374 aa)    
Predicted Functional Partners:
SHF07748.1
Chemotaxis protein MotA.
 
 0.998
SHE36417.1
Hypothetical protein.
 
     0.960
SHE36442.1
OmpA family protein.
   
 0.864
SHF08215.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.846
SHE36368.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.791
SHF08023.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.788
SHF08197.1
Flagellar protein FlgJ.
  
  
 0.759
SHE57578.1
Flagellar hook-associated protein 2.
  
  
 0.756
SHF10860.1
Two-component system, sensor histidine kinase RpfC.
  
  
 0.756
SHF14458.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
  
 0.752
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.