STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE37128.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
SHE37145.1
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.832
SHE37173.1
SAM-dependent methyltransferase, MidA family.
       0.832
SHE37222.1
ADP-L-glycero-D-manno-heptose 6-epimerase.
       0.832
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.789
SHE88675.1
Hypothetical protein.
  
     0.770
SHE99724.1
Periplasmic chaperone for outer membrane proteins Skp.
  
     0.767
SHE46416.1
Protein phosphatase.
  
     0.766
SHF33218.1
Hypothetical protein.
  
     0.752
SHE83551.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.746
SHF54196.1
Transglycosylase SLT domain-containing protein.
  
     0.717
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.