STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE51886.1Transposase DDE domain-containing protein. (361 aa)    
Predicted Functional Partners:
SHF21451.1
Transposase domain.
 
     0.969
SHF49569.1
Transposase domain.
 
     0.969
SHF60933.1
Transposase domain.
 
     0.969
SHE64344.1
Transposase domain.
 
     0.963
SHE78259.1
Transposase domain.
 
     0.931
SHE81299.1
Transposase domain.
 
     0.931
SHF50361.1
Transposase domain.
 
     0.914
SHE57479.1
Transposase domain.
 
     0.813
SHE51913.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
       0.435
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.