STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE55227.1Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
SHE55205.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.987
SHE55185.1
Putative spermidine/putrescine transport system permease protein.
 0.982
SHE55163.1
Putative spermidine/putrescine transport system permease protein.
 
 0.975
SHF43923.1
Spermidine/putrescine transport system permease protein.
 0.946
SHE45551.1
Putative spermidine/putrescine transport system permease protein.
 0.942
SHF43909.1
Spermidine/putrescine transport system permease protein.
 
 
 0.939
SHE45530.1
Putative spermidine/putrescine transport system permease protein.
 
 0.928
SHF13239.1
ATP-binding cassette, subfamily C, CydD.
 
     
0.899
SHE55724.1
ATP-binding cassette, subfamily C, CydD.
 
     
0.896
SHF43939.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.892
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.