STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hldED-alpha,beta-D-heptose 7-phosphate 1-kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (486 aa)    
Predicted Functional Partners:
SHF43303.1
D-sedoheptulose 7-phosphate isomerase.
  
 0.997
SHE37222.1
ADP-L-glycero-D-manno-heptose 6-epimerase.
 
 
 0.979
SHE46541.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.867
SHE95734.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.866
SHE88613.1
Protein N-acetyltransferase, RimJ/RimL family.
     
 0.786
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family.
 
  
 0.713
SHE59044.1
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Belongs to the KdsB family.
 
  
 0.713
SHE37750.1
Glycosyltransferase, GT2 family.
    
 0.688
SHE95808.1
Glycosyltransferase, GT2 family.
    
 0.688
SHF58191.1
Hypothetical protein.
    
 0.688
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.