STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE97066.1TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family. (82 aa)    
Predicted Functional Partners:
SHE92331.1
Cysteine desulfurase.
   
 0.978
SHF32308.1
Oxidoreductase NAD-binding domain-containing protein.
  
 
 0.772
SHF50034.1
Sulfide:quinone oxidoreductase.
    
 0.752
SHE91916.1
Adenylyltransferase and sulfurtransferase.
 
  
 0.748
cysN
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.715
SHE97111.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
  
    0.637
SHF03115.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
    
 0.636
SHF19333.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
    
 0.636
fur
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
     
 0.635
SHE97158.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.498
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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