STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF16919.1Membrane dipeptidase. (337 aa)    
Predicted Functional Partners:
SHE38399.1
Gamma-glutamyl-gamma-aminobutyrate hydrolase.
      0.900
SHE83444.1
Putative glutamine amidotransferase.
      0.900
SHF18540.1
Putative glutamine amidotransferase.
      0.900
SHE31088.1
Putative glutamine amidotransferase.
      0.892
SHF16894.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.773
SHF16861.1
Hypothetical protein.
       0.544
SHE87076.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
   
 0.492
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
   0.455
SHF16849.1
Protein-disulfide isomerase.
       0.429
SHE65772.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
  
   
 0.418
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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