STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF17570.1Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-). (230 aa)    
Predicted Functional Partners:
SHF17545.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.991
SHF15703.1
Polar amino acid transport system substrate-binding protein.
 
  0.983
SHF17614.1
Polar amino acid transport system substrate-binding protein.
 
  0.966
SHF15750.1
Polar amino acid transport system ATP-binding protein.
 
 0.957
SHF18518.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.956
SHE68570.1
Polar amino acid transport system ATP-binding protein.
 
 0.954
SHF17586.1
Polar amino acid transport system permease protein.
 
  
 
0.897
SHF66290.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
  
  0.889
SHF50451.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     0.860
SHF55988.1
Extracellular solute-binding protein, family 3.
  
  0.828
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.