STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF17614.1Polar amino acid transport system substrate-binding protein. (287 aa)    
Predicted Functional Partners:
SHF17570.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 
  0.966
SHF17586.1
Polar amino acid transport system permease protein.
 
  0.962
SHF17545.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
  0.944
SHF17656.1
Ectoine hydroxylase.
 
     0.847
SHF10860.1
Two-component system, sensor histidine kinase RpfC.
   
 0.765
SHE76343.1
Response regulator receiver domain-containing protein.
   
 0.742
ectC
Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
 
     0.741
SHF17700.1
Diaminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.730
SHF21082.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 0.722
SHF17629.1
Aspartate kinase.
       0.693
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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