STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF21227.1Cytochrome c oxidase assembly protein subunit 15. (347 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.980
SHF21201.1
Cytochrome c oxidase assembly protein subunit 15.
 
  
 
0.963
SHE59024.1
Cytochrome c2.
 
  
 0.830
SHE85209.1
Surfeit locus 1 family protein.
 
 
 0.825
SHF21239.1
Microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62.
       0.790
SHE88524.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 0.784
SHE74176.1
NADH:ubiquinone oxidoreductase subunit.
  
     0.646
SHE92353.1
Ferredoxin, 2Fe-2S.
 
  
 0.599
SHE38727.1
ETC complex I subunit conserved region.
  
    0.588
SHF38975.1
Protein SCO1/2.
 
 
 0.569
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.