Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE43928.1 | SHE76343.1 | SAMN02746095_00445 | SAMN02746095_01147 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulator receiver domain-containing protein. | 0.606 |
| SHE43928.1 | SHE87921.1 | SAMN02746095_00445 | SAMN02746095_01469 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.546 |
| SHE43928.1 | SHF10860.1 | SAMN02746095_00445 | SAMN02746095_02147 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, sensor histidine kinase RpfC. | 0.533 |
| SHE43928.1 | SHF21082.1 | SAMN02746095_00445 | SAMN02746095_02470 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.801 |
| SHE43928.1 | SHF37267.1 | SAMN02746095_00445 | SAMN02746095_03007 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.832 |
| SHE76343.1 | SHE43928.1 | SAMN02746095_01147 | SAMN02746095_00445 | Response regulator receiver domain-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.606 |
| SHE76343.1 | SHE87921.1 | SAMN02746095_01147 | SAMN02746095_01469 | Response regulator receiver domain-containing protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.998 |
| SHE76343.1 | SHF03378.1 | SAMN02746095_01147 | SAMN02746095_01924 | Response regulator receiver domain-containing protein. | Two component transcriptional regulator, LuxR family. | 0.969 |
| SHE76343.1 | SHF10860.1 | SAMN02746095_01147 | SAMN02746095_02147 | Response regulator receiver domain-containing protein. | Two-component system, sensor histidine kinase RpfC. | 0.999 |
| SHE76343.1 | SHF14324.1 | SAMN02746095_01147 | SAMN02746095_02242 | Response regulator receiver domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.970 |
| SHE76343.1 | SHF21082.1 | SAMN02746095_01147 | SAMN02746095_02470 | Response regulator receiver domain-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
| SHE76343.1 | SHF26149.1 | SAMN02746095_01147 | SAMN02746095_02630 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.993 |
| SHE76343.1 | SHF37267.1 | SAMN02746095_01147 | SAMN02746095_03007 | Response regulator receiver domain-containing protein. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.958 |
| SHE76343.1 | SHF52603.1 | SAMN02746095_01147 | SAMN02746095_03584 | Response regulator receiver domain-containing protein. | Urea transport system substrate-binding protein. | 0.438 |
| SHE76343.1 | SHF52690.1 | SAMN02746095_01147 | SAMN02746095_03590 | Response regulator receiver domain-containing protein. | Tfp pilus assembly protein PilF. | 0.925 |
| SHE87921.1 | SHE43928.1 | SAMN02746095_01469 | SAMN02746095_00445 | His Kinase A (phospho-acceptor) domain-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.546 |
| SHE87921.1 | SHE76343.1 | SAMN02746095_01469 | SAMN02746095_01147 | His Kinase A (phospho-acceptor) domain-containing protein. | Response regulator receiver domain-containing protein. | 0.998 |
| SHE87921.1 | SHF03378.1 | SAMN02746095_01469 | SAMN02746095_01924 | His Kinase A (phospho-acceptor) domain-containing protein. | Two component transcriptional regulator, LuxR family. | 0.899 |
| SHE87921.1 | SHF10860.1 | SAMN02746095_01469 | SAMN02746095_02147 | His Kinase A (phospho-acceptor) domain-containing protein. | Two-component system, sensor histidine kinase RpfC. | 0.999 |
| SHE87921.1 | SHF14324.1 | SAMN02746095_01469 | SAMN02746095_02242 | His Kinase A (phospho-acceptor) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.958 |
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