STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF41853.1Flavin reductase. (164 aa)    
Predicted Functional Partners:
SHF41874.1
Vanillate O-demethylase ferredoxin subunit.
 
 
 0.829
SHF41938.1
Phenylpropionate dioxygenase, large terminal subunit.
 
     0.825
SHF41908.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
     0.819
SHF41897.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.804
SHF41986.1
Acyl-CoA dehydrogenase.
 
  
  0.752
SHF06007.1
cob(II)yrinic acid a,c-diamide reductase.
   
 
  0.698
SHE75661.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.681
SHF47865.1
Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 
  0.647
SHF41960.1
Hypothetical protein.
       0.623
SHE45692.1
Luciferase-like monooxygenase; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
 
 0.584
Your Current Organism:
Acidocella aminolytica
NCBI taxonomy Id: 1120923
Other names: A. aminolytica 101 = DSM 11237, Acidocella aminolytica 101, Acidocella aminolytica 101 = DSM 11237, Acidocella aminolytica DSM 11237, Acidocella aminolytica DSM 11237 = 101
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