STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482865_04782Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_000482865_06063
Unannotated protein.
  
 
 0.730
GCA_000482865_05172
Unannotated protein.
     
 0.660
GCA_000482865_04381
Unannotated protein.
  
 
 0.609
GCA_000482865_04079
Unannotated protein.
  
     0.562
GCA_000482865_03793
Unannotated protein.
  
  
 0.513
GCA_000482865_06009
Unannotated protein.
  
  
 0.513
GCA_000482865_03037
Unannotated protein.
  
  
  0.510
GCA_000482865_05929
Unannotated protein.
  
     0.504
GCA_000482865_01106
Unannotated protein.
  
 
  0.497
GCA_000482865_03248
Unannotated protein.
  
     0.461
Your Current Organism:
Actinokineospora inagensis
NCBI taxonomy Id: 1120935
Other names: A. inagensis DSM 44258, Actinokineospora inagensis DSM 44258
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.