STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381885_04968Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000381885_04970
Unannotated protein.
 
 0.996
GCA_000381885_04971
Unannotated protein.
 
 
 0.992
GCA_000381885_02496
Unannotated protein.
 
 0.984
GCA_000381885_01352
Unannotated protein.
 
 0.982
GCA_000381885_00800
Unannotated protein.
 
 0.979
GCA_000381885_05106
Unannotated protein.
 
 0.979
GCA_000381885_05235
Unannotated protein.
 
 0.979
GCA_000381885_04980
Unannotated protein.
 
 0.975
GCA_000381885_01353
Unannotated protein.
 
 
 0.964
GCA_000381885_02495
Unannotated protein.
 
 
 0.964
Your Current Organism:
Actinomadura atramentaria
NCBI taxonomy Id: 1120936
Other names: A. atramentaria DSM 43919, Actinomadura atramentaria DSM 43919, Actinomadura atramentaria SF2197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.