STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429105_01240Unannotated protein. (403 aa)    
Predicted Functional Partners:
GCA_000429105_01239
Unannotated protein.
 
 0.970
GCA_000429105_01238
Unannotated protein.
 
    0.897
GCA_000429105_01241
Unannotated protein.
 
   
 0.854
GCA_000429105_00553
Unannotated protein.
 
  
 0.740
GCA_000429105_01140
Unannotated protein.
  
 
 0.650
GCA_000429105_00164
Unannotated protein.
   
 
 0.624
GCA_000429105_00905
Unannotated protein.
 
   
 0.619
GCA_000429105_00101
Unannotated protein.
 
  
 0.609
GCA_000429105_01232
Unannotated protein.
     
 0.596
GCA_000429105_01237
Unannotated protein.
       0.563
Your Current Organism:
Schaalia suimastitidis
NCBI taxonomy Id: 1120946
Other names: Actinomyces suimastitidis DSM 15538, S. suimastitidis DSM 15538, Schaalia suimastitidis DSM 15538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.