STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_00192Unannotated protein. (350 aa)    
Predicted Functional Partners:
GCA_000379625_00193
Unannotated protein.
 
 0.999
GCA_000379625_00191
Unannotated protein.
  
  
 0.966
GCA_000379625_00185
Unannotated protein.
 
 
 0.839
GCA_000379625_04527
Unannotated protein.
  
  
 0.728
GCA_000379625_00190
Unannotated protein.
       0.721
GCA_000379625_00189
Unannotated protein.
 
   
 0.643
GCA_000379625_00188
Unannotated protein.
       0.574
GCA_000379625_05117
Unannotated protein.
  
   
 0.557
GCA_000379625_05186
Unannotated protein.
 
 
 
 0.538
GCA_000379625_04702
Unannotated protein.
   
  
 0.526
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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