STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_01426Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_000379625_01427
Unannotated protein.
       0.779
GCA_000379625_01181
Unannotated protein.
    
 0.730
GCA_000379625_04333
Unannotated protein.
     
 0.713
GCA_000379625_02176
Unannotated protein.
     
 0.683
GCA_000379625_01428
Unannotated protein.
       0.576
GCA_000379625_01424
Unannotated protein.
       0.558
GCA_000379625_01425
Unannotated protein.
       0.558
GCA_000379625_01423
Unannotated protein.
   
   0.536
GCA_000379625_01169
Unannotated protein.
     
 0.456
GCA_000379625_03582
Unannotated protein.
  
 0.427
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.