STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_02810Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000379625_02809
Unannotated protein.
 
 0.999
GCA_000379625_02808
Unannotated protein.
 
 0.990
GCA_000379625_04070
Unannotated protein.
 
 
 0.832
GCA_000379625_04755
Unannotated protein.
 
 0.807
GCA_000379625_00147
Unannotated protein.
  
 
 0.800
GCA_000379625_00370
Unannotated protein.
  
 
 0.727
GCA_000379625_01468
Unannotated protein.
 
  
 0.626
GCA_000379625_02114
Unannotated protein.
    
   0.573
GCA_000379625_02807
Unannotated protein.
       0.465
GCA_000379625_00195
Unannotated protein.
    
   0.452
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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