STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_03169Unannotated protein. (413 aa)    
Predicted Functional Partners:
GCA_000379625_03168
Unannotated protein.
       0.727
GCA_000379625_04411
Unannotated protein.
  
   0.697
GCA_000379625_01754
Unannotated protein.
    
   0.667
GCA_000379625_04992
Unannotated protein.
 
   
 0.650
GCA_000379625_04977
Unannotated protein.
  
 
   0.615
GCA_000379625_00769
Unannotated protein.
    
   0.594
GCA_000379625_01236
Unannotated protein.
    
   0.594
GCA_000379625_04581
Unannotated protein.
    
   0.594
GCA_000379625_00845
Unannotated protein.
    
   0.577
GCA_000379625_04079
Unannotated protein.
    
   0.577
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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