STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_03309Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000379625_03517
Unannotated protein.
    
 0.947
GCA_000379625_02716
Unannotated protein.
  
 
 0.941
GCA_000379625_05564
Unannotated protein.
 
 
 0.938
GCA_000379625_02655
Unannotated protein.
    
 0.931
GCA_000379625_00869
Unannotated protein.
   
 0.929
GCA_000379625_00220
Unannotated protein.
 
  
 0.867
GCA_000379625_00221
Unannotated protein.
  
  
 
0.867
GCA_000379625_05696
Unannotated protein.
   
 
 0.839
GCA_000379625_05020
Unannotated protein.
  
 0.837
GCA_000379625_00740
Unannotated protein.
  
    0.829
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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