STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_03389Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_000379625_01760
Unannotated protein.
     
 0.926
GCA_000379625_05586
Unannotated protein.
 
  
 0.877
GCA_000379625_04239
Unannotated protein.
  
  
 
0.800
GCA_000379625_01240
Unannotated protein.
  
  
 
0.799
GCA_000379625_03388
Unannotated protein.
  
  
 0.748
GCA_000379625_00564
Unannotated protein.
  
 
 0.671
GCA_000379625_04192
Unannotated protein.
  
 
 0.671
GCA_000379625_05190
Unannotated protein.
     
 0.639
GCA_000379625_03390
Unannotated protein.
       0.575
GCA_000379625_03387
Unannotated protein.
       0.547
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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