STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_03788Unannotated protein. (118 aa)    
Predicted Functional Partners:
GCA_000379625_02175
Unannotated protein.
  
   
 0.858
GCA_000379625_02816
Unannotated protein.
  
   
 0.857
GCA_000379625_04705
Unannotated protein.
  
     0.769
GCA_000379625_04904
Unannotated protein.
  
     0.759
GCA_000379625_03520
Unannotated protein.
  
     0.746
GCA_000379625_03309
Unannotated protein.
  
     0.729
GCA_000379625_00638
Unannotated protein.
  
     0.709
GCA_000379625_03498
Unannotated protein.
  
   
 0.689
GCA_000379625_05251
Unannotated protein.
  
     0.689
GCA_000379625_05209
Unannotated protein.
  
     0.687
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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