STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04169Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_000379625_03707
Unannotated protein.
 
   
 0.785
GCA_000379625_02763
Unannotated protein.
 
   
 0.710
GCA_000379625_02807
Unannotated protein.
   
    0.690
GCA_000379625_04883
Unannotated protein.
   
    0.690
GCA_000379625_03475
Unannotated protein.
  
    0.675
GCA_000379625_05339
Unannotated protein.
 
     0.619
GCA_000379625_00442
Unannotated protein.
 
   
0.614
GCA_000379625_02747
Unannotated protein.
  
    0.590
GCA_000379625_00106
Unannotated protein.
   
    0.586
GCA_000379625_00349
Unannotated protein.
   
    0.567
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.