STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04312Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_000379625_04313
Unannotated protein.
       0.810
GCA_000379625_04311
Unannotated protein.
       0.796
GCA_000379625_04314
Unannotated protein.
       0.793
GCA_000379625_04309
Unannotated protein.
       0.716
GCA_000379625_04308
Unannotated protein.
       0.704
GCA_000379625_04310
Unannotated protein.
       0.686
GCA_000379625_04315
Unannotated protein.
       0.644
GCA_000379625_04307
Unannotated protein.
       0.454
GCA_000379625_04306
Unannotated protein.
       0.453
GCA_000379625_04316
Unannotated protein.
       0.418
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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