STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04492Unannotated protein. (349 aa)    
Predicted Functional Partners:
GCA_000379625_04493
Unannotated protein.
 
  
  0.960
GCA_000379625_04495
Unannotated protein.
 
   
 0.943
GCA_000379625_05587
Unannotated protein.
  
 
 0.936
GCA_000379625_00809
Unannotated protein.
  
 
 0.913
GCA_000379625_00194
Unannotated protein.
  
  
 
0.841
GCA_000379625_04494
Unannotated protein.
 
     0.829
GCA_000379625_05585
Unannotated protein.
  
 
 0.824
GCA_000379625_05582
Unannotated protein.
  
 
 0.823
GCA_000379625_01181
Unannotated protein.
     
 0.814
GCA_000379625_00589
Unannotated protein.
 
 
 0.807
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.