STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04587Unannotated protein. (185 aa)    
Predicted Functional Partners:
GCA_000379625_01008
Unannotated protein.
  
     0.595
GCA_000379625_04588
Unannotated protein.
       0.563
GCA_000379625_02940
Unannotated protein.
  
     0.560
GCA_000379625_04321
Unannotated protein.
  
     0.512
GCA_000379625_05084
Unannotated protein.
  
     0.490
GCA_000379625_05372
Unannotated protein.
  
     0.488
GCA_000379625_01950
Unannotated protein.
  
     0.457
GCA_000379625_00247
Unannotated protein.
  
     0.450
GCA_000379625_01897
Unannotated protein.
  
     0.431
GCA_000379625_00552
Unannotated protein.
  
     0.416
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.