STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04738Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_000379625_01064
Unannotated protein.
  
 
 0.888
GCA_000379625_00860
Unannotated protein.
 
 
 
  0.779
GCA_000379625_00861
Unannotated protein.
   
 
  0.768
GCA_000379625_05102
Unannotated protein.
  
 
 0.734
GCA_000379625_00881
Unannotated protein.
  
 
 0.694
GCA_000379625_04792
Unannotated protein.
 
 0.636
GCA_000379625_04739
Unannotated protein.
       0.634
GCA_000379625_02343
Unannotated protein.
 
    0.632
GCA_000379625_04957
Unannotated protein.
 
 
 0.434
GCA_000379625_00706
Unannotated protein.
 
 
 0.429
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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