STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_05245Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_000379625_05246
Unannotated protein.
       0.827
GCA_000379625_05244
Unannotated protein.
       0.732
GCA_000379625_00009
Unannotated protein.
      0.705
GCA_000379625_00921
Unannotated protein.
      0.702
GCA_000379625_00273
Unannotated protein.
      0.689
GCA_000379625_05247
Unannotated protein.
       0.642
GCA_000379625_00642
Unannotated protein.
 
     0.516
GCA_000379625_05249
Unannotated protein.
       0.498
GCA_000379625_05252
Unannotated protein.
  
  
 0.490
GCA_000379625_01417
Unannotated protein.
    
  0.471
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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