STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_05247Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_000379625_03376
Unannotated protein.
    
  0.675
GCA_000379625_05246
Unannotated protein.
       0.652
GCA_000379625_05245
Unannotated protein.
       0.642
GCA_000379625_05248
Unannotated protein.
       0.589
GCA_000379625_05249
Unannotated protein.
       0.580
GCA_000379625_05250
Unannotated protein.
       0.580
GCA_000379625_05244
Unannotated protein.
 
     0.561
GCA_000379625_01396
Unannotated protein.
      
 0.527
GCA_000379625_04187
Unannotated protein.
      
 0.493
GCA_000379625_00704
Unannotated protein.
      
 0.404
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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