STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373925_03947Unannotated protein. (540 aa)    
Predicted Functional Partners:
GCA_000373925_01684
Unannotated protein.
 
 0.993
GCA_000373925_01682
Unannotated protein.
  
 0.979
GCA_000373925_02750
Unannotated protein.
   
 0.863
GCA_000373925_01708
Unannotated protein.
 
 0.843
GCA_000373925_02994
Unannotated protein.
   
 
  0.820
GCA_000373925_04585
Unannotated protein.
    
  0.818
GCA_000373925_04313
Unannotated protein.
  
 0.816
GCA_000373925_03946
Unannotated protein.
 
     0.810
GCA_000373925_03949
Unannotated protein.
 
     0.784
GCA_000373925_03948
Unannotated protein.
       0.768
Your Current Organism:
Actinopolymorpha alba
NCBI taxonomy Id: 1120950
Other names: A. alba DSM 45243, Actinopolymorpha alba DSM 45243, Actinopolymorpha sp. YIM 48868
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.