STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429125_02684Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000429125_03400
Unannotated protein.
  
 0.977
GCA_000429125_02686
Unannotated protein.
  
 0.961
GCA_000429125_00877
Unannotated protein.
   
 0.901
GCA_000429125_02510
Unannotated protein.
  
 
 0.849
GCA_000429125_02687
Unannotated protein.
 
     0.848
GCA_000429125_00321
Unannotated protein.
  
 0.835
GCA_000429125_03015
Unannotated protein.
  
 0.835
GCA_000429125_03147
Unannotated protein.
  
 0.835
GCA_000429125_02681
Unannotated protein.
 
     0.834
GCA_000429125_02683
Unannotated protein.
 
     0.834
Your Current Organism:
Aequorivita capsosiphonis
NCBI taxonomy Id: 1120951
Other names: A. capsosiphonis DSM 23843, Aequorivita capsosiphonis DSM 23843
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.