STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429145_01140Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_000429145_01141
Unannotated protein.
 0.996
GCA_000429145_03192
Unannotated protein.
   
 
 0.959
GCA_000429145_02774
Unannotated protein.
     
 0.944
GCA_000429145_00952
Unannotated protein.
    
  0.914
GCA_000429145_01142
Unannotated protein.
 
 0.911
GCA_000429145_01139
Unannotated protein.
 
  
 0.908
GCA_000429145_00713
Unannotated protein.
    
 0.894
GCA_000429145_00714
Unannotated protein.
   
 
 0.879
GCA_000429145_01148
Unannotated protein.
  
 
 0.877
GCA_000429145_02191
Unannotated protein.
  
 
 0.875
Your Current Organism:
Aestuariibacter salexigens
NCBI taxonomy Id: 1120953
Other names: A. salexigens DSM 15300, Aestuariibacter salexigens DSM 15300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.