STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429145_01874Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000429145_01176
Unannotated protein.
 
  
 0.602
GCA_000429145_01178
Unannotated protein.
 
   
 0.599
GCA_000429145_01173
Unannotated protein.
 
  
 0.583
GCA_000429145_00956
Unannotated protein.
 
   
 0.574
GCA_000429145_00957
Unannotated protein.
 
  
 0.564
GCA_000429145_00954
Unannotated protein.
 
  
 0.554
GCA_000429145_01875
Unannotated protein.
       0.553
GCA_000429145_02031
Unannotated protein.
 
     0.544
GCA_000429145_01873
Unannotated protein.
       0.531
GCA_000429145_02818
Unannotated protein.
 
  
 0.475
Your Current Organism:
Aestuariibacter salexigens
NCBI taxonomy Id: 1120953
Other names: A. salexigens DSM 15300, Aestuariibacter salexigens DSM 15300
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.