STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429145_02777Unannotated protein. (263 aa)    
Predicted Functional Partners:
GCA_000429145_01789
Unannotated protein.
 
 0.951
GCA_000429145_02776
Unannotated protein.
       0.550
GCA_000429145_01776
Unannotated protein.
 
 
 
 0.542
GCA_000429145_00410
Unannotated protein.
  
 
   0.535
GCA_000429145_00482
Unannotated protein.
   
    0.501
GCA_000429145_02778
Unannotated protein.
       0.500
GCA_000429145_03394
Unannotated protein.
     
 0.478
GCA_000429145_01230
Unannotated protein.
    
   0.475
GCA_000429145_02080
Unannotated protein.
    
   0.475
GCA_000429145_03003
Unannotated protein.
    
   0.475
Your Current Organism:
Aestuariibacter salexigens
NCBI taxonomy Id: 1120953
Other names: A. salexigens DSM 15300, Aestuariibacter salexigens DSM 15300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.