STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421525_02179Unannotated protein. (415 aa)    
Predicted Functional Partners:
GCA_000421525_01169
Unannotated protein.
   
   0.901
GCA_000421525_01663
Unannotated protein.
    
  0.778
GCA_000421525_01200
Unannotated protein.
     
 0.745
GCA_000421525_01368
Unannotated protein.
 
  
 0.684
GCA_000421525_02163
Unannotated protein.
    
  0.610
GCA_000421525_01972
Unannotated protein.
   
 
 0.607
GCA_000421525_02180
Unannotated protein.
       0.605
GCA_000421525_00400
Unannotated protein.
  
 
  0.566
GCA_000421525_01045
Unannotated protein.
    
 0.557
GCA_000421525_01461
Unannotated protein.
    
 0.514
Your Current Organism:
Aestuariimicrobium kwangyangense
NCBI taxonomy Id: 1120954
Other names: A. kwangyangense DSM 21549, Aestuariimicrobium kwangyangense DSM 21549
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.