STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421525_02460Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_000421525_00023
Unannotated protein.
  
 
0.875
GCA_000421525_02624
Unannotated protein.
 
 
0.759
GCA_000421525_00085
Unannotated protein.
   
  0.701
GCA_000421525_01606
Unannotated protein.
 
 
 0.697
GCA_000421525_02640
Unannotated protein.
 
 
 0.695
GCA_000421525_00188
Unannotated protein.
    
 0.676
GCA_000421525_00351
Unannotated protein.
 
0.663
GCA_000421525_02654
Unannotated protein.
    
  0.645
GCA_000421525_00064
Unannotated protein.
 
 
0.594
GCA_000421525_00771
Unannotated protein.
 
 
0.591
Your Current Organism:
Aestuariimicrobium kwangyangense
NCBI taxonomy Id: 1120954
Other names: A. kwangyangense DSM 21549, Aestuariimicrobium kwangyangense DSM 21549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.