STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ19335.1Cupin domain protein. (131 aa)    
Predicted Functional Partners:
SCZ19306.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.550
SCZ19327.1
Hypothetical protein.
    
  0.550
SCZ19343.1
C4-dicarboxylate transporter, DctM subunit.
       0.545
SCZ19352.1
C4-dicarboxylate transporter, DctQ subunit.
       0.545
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.