STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ21143.1Osmoprotectant transport system permease protein. (244 aa)    
Predicted Functional Partners:
SCZ21116.1
Osmoprotectant transport system substrate-binding protein.
 
 0.999
SCZ21136.1
Osmoprotectant transport system ATP-binding protein.
 0.997
SCZ21126.1
Osmoprotectant transport system permease protein.
 
  
 
0.933
SCZ36737.1
Glycine betaine/L-proline transport ATP binding subunit.
 
0.843
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
       0.625
SCZ34967.1
Glycine betaine/proline transport system ATP-binding protein.
  
  0.570
SCZ44455.1
Glycine betaine/proline transport system ATP-binding protein.
  
  0.481
SCZ44416.1
D-methionine transport system substrate-binding protein.
    
  0.478
SCZ21105.1
AraC-type DNA-binding protein.
       0.423
SCZ34963.1
Glycine betaine/proline transport system permease protein.
 
 
 
0.414
Your Current Organism:
Afifella marina
NCBI taxonomy Id: 1120955
Other names: A. marina DSM 2698, Afifella marina DSM 2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.